BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024B08SP1|AL428170
(1065 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1801 1993 0.0
>3x_Contig1801
Length = 57606
Score = 1993 bits (1000), Expect = 0.0
Identities = 1041/1061 (98%)
Strand = Plus / Plus
Query: 1 atcatatgttgacgattctaaaacatgagaatcatcaagttctagaaaaattgggtataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26408 atcatatgttgacgattctaaaacatgagaatcatcaagttctagaaaaattgggtataa 26467
Query: 61 ccagtaaagacgcagaaatgtcagamgacgatgtaataaaagtytggaatgccagattca 120
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 26468 ccagtaaagacgcagaaatgtcagacgacgatgtaataaaagtctggaatgccagattca 26527
Query: 121 gtttcactgaaaaagtagttaatttgaaagttgaaatgatgtgtaaaaactacgaaccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26528 gtttcactgaaaaagtagttaatttgaaagttgaaatgatgtgtaaaaactacgaaccaa 26587
Query: 181 atctcttctcatcaagttatcagcacgctcttgaaaaattagaagagaggcattcggcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26588 atctcttctcatcaagttatcagcacgctcttgaaaaattagaagagaggcattcggcca 26647
Query: 241 aggcagatgcaatagatgtyactcaatttttgcaacaagtctttgactcaacagattttg 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 26648 aggcagatgcaatagatgtcactcaatttttgcaacaagtctttgactcaacagattttg 26707
Query: 301 acctcttttatgggatggatgtaggtgaactccccaagatggacagcattcttccataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26708 acctcttttatgggatggatgtaggtgaactccccaagatggacagcattcttccataat 26767
Query: 361 ttttttgggcttggtactttccctcttgttccttgtatagaaaagtacaatatttaacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26768 ttttttgggcttggtactttccctcttgttccttgtatagaaaagtacaatatttaacaa 26827
Query: 421 tttcccatattcgatttgtaaccattattaaagaaaactggaacaggaacacgggcacct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26828 tttcccatattcgatttgtaaccattattaaagaaaactggaacaggaacacgggcacct 26887
Query: 481 tctctctcgagaacgatacaaggtacgtcgttcaaaaccaaatatcgtaatcttttcaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26888 tctctctcgagaacgatacaaggtacgtcgttcaaaaccaaatatcgtaatcttttcaaa 26947
Query: 541 tttgagagtatagttgtatatgtctttttattgtgatgaaccattgcatgatagcacttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26948 tttgagagtatagttgtatatgtctttttattgtgatgaaccattgcatgatagcacttg 27007
Query: 601 atgacgtcagattctgtgatgggttcaatcggggttgagtttctatgcatggatttatag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27008 atgacgtcagattctgtgatgggttcaatcggggttgagtttctatgcatggatttatag 27067
Query: 661 tgcctattgtattcattaatcttggtgacgaakccgangagattcattggttgtgtccta 720
|||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 27068 tgcctattgtattcattaatcttggtgaagaagtaagagagattcattggttgtgtccta 27127
Query: 721 acagaagggtatatgtcaaatgcttttgaataaggtaataaagagaggtatttcatcatt 780
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27128 acagaagggtatatataaaatgcttttgaataaggtaataaagagaggtatttcatcatt 27187
Query: 781 gtgaatatatccttagcgatcaaatcgcttaaatctctgatcaccatatctttcgacgaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27188 gtgaatatatccttagcgatcaaatcgcttaaatctctgatcaccatatctttcgacgaa 27247
Query: 841 ttgaaaaatttaccgtatagtatatcctgaaacacatgattacaatcatcacaatggcag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27248 ttgaaaaatttaccgtatagtatatcctgaaacacatgattacaatcatcacaatggcag 27307
Query: 901 ttatgtaagadtttgaaccttgacccctcgatagaaatgatctgcctgtcgatattttcg 960
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27308 ttatgtaagaatttgaaccttgacccctcgatagaaatgatctgcctgtcgatattttcg 27367
Query: 961 aatctcaaatctaggaattgtwgctctctacaatttwatwaaatgggcagggatacatcc 1020
||||||||||||||||||||| |||||||||||||| || |||||| |||| ||||||||
Sbjct: 27368 aatctcaaatctaggaattgtagctctctacaatttaataaaatggacaggaatacatcc 27427
Query: 1021 gttgaaacaggrtgtggagtgaactcatgcaaataatctgt 1061
||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 27428 gttgaaacaggatgtggagtgaactcatgcaaaaaatctgt 27468
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8292
Number of Sequences: 1807
Number of extensions: 8292
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 1065
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1049
effective length of database: 10,329,639
effective search space: 10835791311
effective search space used: 10835791311
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)